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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
171
candidate regulatory elements
135
target gene predictions
94
chromatin state
54
binding sites
34
histone modifications
31
accessible chromatin
5
eQTL
3
gene expression
Date released
266
September, 2022
149
February, 2021
31
February, 2024
25
June, 2020
21
October, 2022
12
May, 2021
9
November, 2021
5
August, 2017
3
January, 2022
3
March, 2024
2
August, 2021
1
March, 2020
Available data
430
bed bed3+
89
bed bed9
6
bigWig
3
tsv
Organism
527
Homo sapiens
Biosample type
235
tissue
232
cell line
55
primary cell
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
518
AMP
9
ENCODE
Genome assembly (visualization)
521
hg19
131
GRCh38
BIOSAMPLE
TYPE
527 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
tissue
placenta
26
15
14
1
2
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
chorionic villus
8
4
4
+ See 15 more…
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 32 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
2
1
1
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
amnion mesenchymal stem cell
1
1
1
+ See 8 more…
in vitro differentiated cells
trophoblast cell
2
2
1
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