Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
244
candidate regulatory elements
182
target gene predictions
147
chromatin state
59
binding sites
53
accessible chromatin
34
histone modifications
23
gene expression
11
variant allelic effects
9
Fine-mapped variants
9
eQTL
2
caQTL
Date released
387
September, 2022
188
February, 2021
34
February, 2024
23
June, 2020
23
October, 2022
19
November, 2021
16
March, 2020
12
January, 2020
12
May, 2021
11
February, 2020
11
May, 2020
10
August, 2021
6
April, 2019
4
January, 2022
3
April, 2020
3
August, 2017
3
February, 2023
3
November, 2019
2
March, 2024
2
October, 2019
1
May, 2019
Available data
593
bed bed3+
139
bed bed9
31
bigWig
31
tsv
10
bigBed bed9
Organism
773
Homo sapiens
Biosample type
398
tissue
300
cell line
74
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
751
AMP
19
ENCODE
3
LungMap
Genome assembly (visualization)
744
hg19
224
GRCh38
BIOSAMPLE
TYPE
773 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
20
21
1
5
1
3
2
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
heart left ventricle
11
7
8
3
1
1
2
1
+ See 15 more…
cell line
A549
21
19
18
2
1
1
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
IMR-90
2
2
1
2
1
1
GM06990
2
1
1
2
1
1
+ See 33 more…
primary cell
fibroblast of lung
6
4
4
2
fibroblast of cardiac tissue
3
4
3
2
type II pneumocyte
2
4
1
peripheral blood mononuclear cell
4
1
1
lung microvascular endothelial cell
3
1
1
+ See 13 more…
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download