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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
197
candidate regulatory elements
154
target gene predictions
113
chromatin state
67
binding sites
51
accessible chromatin
42
histone modifications
26
gene expression
11
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
325
September, 2022
166
February, 2021
58
February, 2024
24
October, 2022
23
June, 2020
14
November, 2021
12
August, 2021
11
March, 2020
11
May, 2021
6
August, 2017
4
March, 2023
3
April, 2020
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
521
bed bed3+
107
bed bed9
32
bigWig
30
tsv
3
csv
1
bam
1
bigBed bed9
Organism
674
Homo sapiens
Biosample type
319
cell line
242
tissue
106
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
657
AMP
14
ENCODE
3
LungMap
Genome assembly (visualization)
639
hg19
191
GRCh38
2
hg18
BIOSAMPLE
TYPE
674 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
A549
21
19
18
2
1
1
K562
7
23
7
2
1
1
HepG2
2
3
2
3
2
5
GM12878
2
8
2
2
1
1
IMR-90
2
2
1
2
1
1
+ See 35 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
liver
13
10
9
1
4
2
1
7
1
1
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
+ See 3 more…
primary cell
hepatocyte
1
3
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
fibroblast of lung
6
4
4
2
hepatic stellate cell
1
1
1
3
1
1
1
type II pneumocyte
2
4
1
+ See 8 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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