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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
207
candidate regulatory elements
144
target gene predictions
108
chromatin state
98
accessible chromatin
58
binding sites
35
histone modifications
13
gene expression
10
eQTL
9
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
300
September, 2022
179
February, 2021
44
February, 2024
24
February, 2023
24
June, 2020
24
October, 2022
22
November, 2022
15
November, 2021
10
May, 2021
9
March, 2020
8
February, 2020
7
January, 2020
7
May, 2020
5
August, 2017
3
August, 2021
3
March, 2024
3
May, 2022
2
May, 2019
1
January, 2022
1
October, 2019
Available data
560
bed bed3+
103
bed bed9
52
bigWig
17
tsv
3
bigBed bed9
Organism
691
Homo sapiens
Biosample type
379
tissue
222
cell line
82
primary cell
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
676
AMP
15
ENCODE
Genome assembly (visualization)
680
hg19
163
GRCh38
BIOSAMPLE
TYPE
691 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
retina
6
3
3
23
1
1
1
1
1
pigmented layer of retina
20
+ See 24 more…
cell line
K562
7
23
7
1
2
1
GM12878
2
8
2
1
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 29 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
retinal pigment epithelial cell
2
1
1
3
2
1
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
myotube
1
1
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