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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
77
accessible chromatin
67
candidate regulatory elements
50
binding sites
49
gene expression
42
chromatin state
differential activity
30
histone modifications
17
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
113
September, 2022
101
February, 2021
53
February, 2024
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
15
March, 2023
10
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
Available data
340
bed bed3+
57
bigWig
46
tsv
36
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
451
Homo sapiens
Biosample type
226
cell line
117
tissue
105
primary cell
3
in vitro differentiated cells
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
413
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
392
hg19
112
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
451 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
chromatin state
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
2
1
1
2
1
1
+ See 29 more…
tissue
islet of Langerhans
1
6
2
11
3
1
13
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
1
3
1
1
1
endocrine pancreas
4
7
4
blood
2
+ See 8 more…
primary cell
pancreatic ductal cell
3
6
1
3
2
1
pancreatic beta cell
3
8
3
1
pancreatic alpha cell
3
7
3
1
pancreatic acinar cell
3
6
3
1
pancreatic delta cell
4
5
3
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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