Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
261
gene expression
223
accessible chromatin
155
target gene predictions
150
candidate regulatory elements
93
differential activity
77
chromatin state
47
binding sites
47
variant allelic effects
31
histone modifications
10
eQTL
9
Fine-mapped variants
5
caQTL
Date released
229
February, 2021
229
September, 2022
155
September, 2023
127
November, 2021
77
February, 2024
38
March, 2023
38
May, 2021
28
June, 2020
24
August, 2021
21
May, 2020
20
January, 2021
18
March, 2020
17
January, 2020
16
February, 2023
15
November, 2022
13
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
January, 2022
4
March, 2024
4
November, 2019
3
August, 2017
2
May, 2022
1
July, 2020
Available data
657
bed bed3+
344
tsv
185
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1108
Homo sapiens
Biosample type
834
primary cell
201
tissue
47
cell line
26
in vitro differentiated cells
Organ
947
epithelium
650
kidney
460
brain
458
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
797
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
743
hg19
285
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
1108 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 150 more…
tissue
adrenal gland
1
1
17
28
14
1
coronary artery
1
3
3
3
2
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
2
3
2
2
2
3
ascending aorta
1
1
2
4
2
1
1
3
+ See 25 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
Download