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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
accessible chromatin
70
gene expression
68
target gene predictions
63
candidate regulatory elements
45
differential activity
41
chromatin state
21
binding sites
21
eQTL
20
variant allelic effects
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
104
September, 2022
67
February, 2021
51
March, 2023
40
February, 2024
36
May, 2021
21
March, 2020
21
November, 2021
20
January, 2021
20
September, 2023
17
May, 2020
January, 2020
9
August, 2021
8
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
274
bed bed3+
120
tsv
73
bigWig
36
bed bed9
14
bigBed narrowPeak
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
466
Homo sapiens
Biosample type
236
primary cell
187
tissue
40
cell line
3
in vitro differentiated cells
Organ
935
epithelium
638
kidney
448
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
401
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
333
hg19
124
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
466 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
endothelial cell of umbilical vein
2
4
6
3
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 32 more…
tissue
islet of Langerhans
6
11
3
2
13
1
2
1
2
2
body of pancreas
1
5
8
4
1
1
3
pancreas
3
5
5
3
1
1
1
1
coronary artery
2
3
3
3
2
2
3
1
tibial artery
2
2
3
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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