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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
94
candidate regulatory elements
85
accessible chromatin
81
target gene predictions
70
gene expression
54
chromatin state
45
differential activity
23
variant allelic effects
21
binding sites
21
eQTL
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
143
September, 2022
85
February, 2021
51
March, 2023
40
February, 2024
36
May, 2021
21
March, 2020
21
November, 2021
20
January, 2021
20
May, 2020
20
September, 2023
January, 2020
9
August, 2021
9
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
322
bed bed3+
120
tsv
73
bigWig
49
bed bed9
14
bigBed narrowPeak
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
527
Homo sapiens
Biosample type
248
tissue
236
primary cell
40
cell line
3
in vitro differentiated cells
Organ
935
epithelium
638
kidney
450
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
462
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
394
hg19
137
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
527 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
tissue
islet of Langerhans
6
11
3
1
2
13
2
1
2
2
renal pelvis
19
1
9
9
1
body of pancreas
8
5
1
4
1
1
3
pancreas
5
3
5
3
1
1
1
1
coronary artery
3
2
3
3
2
2
3
1
+ See 18 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
endothelial cell of umbilical vein
6
2
4
3
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 32 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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