Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
52
candidate regulatory elements
37
gene expression
34
target gene predictions
33
chromatin state
31
accessible chromatin
19
eQTL
15
Fine-mapped variants
15
binding sites
14
differential activity
11
variant allelic effects
6
histone modifications
3
caQTL
Date released
78
September, 2022
52
February, 2021
20
September, 2023
19
March, 2020
17
February, 2024
13
January, 2020
12
May, 2020
10
February, 2020
7
August, 2021
6
January, 2022
5
May, 2021
4
February, 2023
4
June, 2020
4
March, 2023
3
November, 2019
3
November, 2021
2
April, 2020
2
August, 2017
2
October, 2019
2
September, 2018
1
January, 2018
1
May, 2019
1
November, 2022
1
October, 2022
Available data
155
bed bed3+
68
tsv
31
bed bed9
27
bigWig
7
bigBed bed9
Organism
270
Homo sapiens
Biosample type
167
tissue
95
primary cell
7
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
ovary
23
thyroid gland
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
245
AMP
20
KPMP
3
ENCODE
2
LungMap
Genome assembly (visualization)
207
hg19
92
GRCh38
2
hg18
organ_slims!
ovary
vein
BIOSAMPLE
TYPE
270 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
eQTL
Fine-mapped variants
binding sites
differential activity
variant allelic effects
histone modifications
caQTL
tissue
adipose tissue
7
3
8
6
2
4
1
1
coronary artery
3
1
3
3
3
2
3
2
1
subcutaneous adipose tissue
2
5
1
2
6
3
1
1
tibial artery
3
1
2
3
3
2
3
2
omental fat pad
5
2
2
2
2
2
3
+ See 11 more…
primary cell
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
pulmonary artery endothelial cell
2
1
1
1
1
1
Afferent / Efferent Arteriole Endothelial Cell
3
2
+ See 15 more…
cell line
smooth muscle cell of the coronary artery
1
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
adipose-derived mesenchymal stem cell
1
in vitro differentiated cells
white adipose cell
1
See all biosamples
Download