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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
94
accessible chromatin
92
target gene predictions
73
gene expression
65
chromatin state
45
differential activity
22
eQTL
21
binding sites
20
variant allelic effects
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
161
September, 2022
85
February, 2021
51
March, 2023
40
February, 2024
37
May, 2021
25
November, 2021
22
March, 2020
20
January, 2021
20
September, 2023
17
May, 2020
15
January, 2020
9
August, 2021
9
June, 2020
8
January, 2022
8
October, 2019
7
August, 2018
7
February, 2020
5
August, 2017
5
February, 2023
5
November, 2019
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
346
bed bed3+
123
tsv
82
bigWig
59
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
565
Homo sapiens
Biosample type
278
tissue
244
primary cell
40
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
496
AMP
25
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
428
hg19
159
GRCh38
organ_slims!
ovary
BIOSAMPLE
TYPE
565 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
differential activity
eQTL
binding sites
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
tissue
small intestine
29
1
17
15
1
islet of Langerhans
6
1
11
3
13
2
1
2
1
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
+ See 18 more…
primary cell
endothelial cell of umbilical vein
6
2
4
5
2
1
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 34 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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