Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
53
target gene predictions
51
chromatin state
39
gene expression
38
accessible chromatin
26
binding sites
20
eQTL
15
Fine-mapped variants
14
differential activity
14
histone modifications
13
variant allelic effects
3
caQTL
Date released
123
September, 2022
88
February, 2021
20
March, 2020
20
September, 2023
18
February, 2024
15
January, 2020
14
May, 2020
10
February, 2020
10
June, 2020
8
May, 2021
7
August, 2021
7
January, 2022
4
February, 2023
4
March, 2023
3
August, 2017
3
November, 2019
3
November, 2021
2
April, 2020
2
March, 2024
2
October, 2019
2
October, 2022
2
September, 2018
1
January, 2018
1
May, 2019
1
November, 2022
Available data
235
bed bed3+
70
tsv
48
bed bed9
28
bigWig
9
bigBed bed9
Organism
371
Homo sapiens
Biosample type
183
tissue
125
primary cell
62
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
346
AMP
20
KPMP
3
ENCODE
2
LungMap
Genome assembly (visualization)
304
hg19
111
GRCh38
2
hg18
BIOSAMPLE
TYPE
371 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
binding sites
eQTL
Fine-mapped variants
differential activity
histone modifications
variant allelic effects
caQTL
tissue
adipose tissue
7
8
6
3
2
1
4
1
coronary artery
3
3
3
1
3
2
3
2
1
subcutaneous adipose tissue
2
1
5
2
6
3
1
1
tibial artery
3
2
3
1
3
2
3
2
omental fat pad
5
2
2
2
2
2
3
+ See 14 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
epithelial cell of prostate
4
3
2
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 18 more…
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 9 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
Download