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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
113
accessible chromatin
101
target gene predictions
74
chromatin state
45
binding sites
30
histone modifications
22
variant allelic effects
15
Fine-mapped variants
14
eQTL
2
gene expression
2
pQTL
1
caQTL
Date released
174
September, 2022
117
February, 2021
53
November, 2021
26
February, 2024
23
June, 2020
21
March, 2020
18
January, 2020
18
May, 2020
16
May, 2021
13
October, 2022
8
August, 2017
8
August, 2021
7
November, 2022
5
April, 2020
5
February, 2020
4
October, 2019
3
May, 2022
3
November, 2019
2
January, 2021
2
November, 2020
2
September, 2018
2
September, 2023
1
February, 2023
1
June, 2021
1
May, 2019
Available data
439
bed bed3+
74
bigWig
66
bed bed9
20
tsv
10
bigBed bed9
1
bigBed narrowPeak
Organism
534
Homo sapiens
Biosample type
303
primary cell
146
tissue
48
in vitro differentiated cells
36
cell line
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
470
AMP
53
ENCODE
5
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
534
hg19
193
GRCh38
2
hg18
BIOSAMPLE
TYPE
534 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
gene expression
pQTL
caQTL
primary cell
fibroblast
16
4
1
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
+ See 45 more…
tissue
adipose tissue
7
2
8
6
1
1
3
coronary artery
3
3
3
3
2
3
1
tibial artery
3
3
2
3
2
3
1
ascending aorta
4
1
2
3
1
3
1
omental fat pad
5
2
2
2
3
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
smooth muscle cell of the coronary artery
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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