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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
candidate regulatory elements
105
accessible chromatin
93
target gene predictions
68
chromatin state
67
gene expression
42
binding sites
27
histone modifications
26
differential activity
23
eQTL
23
variant allelic effects
12
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
September, 2022
129
February, 2021
50
November, 2021
37
September, 2023
33
February, 2024
21
June, 2020
19
January, 2020
19
May, 2020
18
March, 2020
16
May, 2021
13
October, 2022
12
August, 2021
11
March, 2023
9
February, 2020
8
August, 2017
8
January, 2022
7
November, 2022
5
April, 2020
4
October, 2019
3
May, 2022
3
November, 2020
2
January, 2021
2
November, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
407
bed bed3+
103
tsv
71
bigWig
60
bed bed9
9
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
596
Homo sapiens
Biosample type
360
primary cell
158
tissue
49
in vitro differentiated cells
28
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
500
AMP
50
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
491
hg19
173
GRCh38
2
hg18
organ_slims!
heart
BIOSAMPLE
TYPE
596 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 56 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
1
6
1
3
tibial artery
3
3
2
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
ascending aorta
4
1
2
3
1
1
1
3
+ See 14 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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