Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
candidate regulatory elements
108
chromatin state
108
target gene predictions
51
accessible chromatin
29
gene expression
21
binding sites
15
Fine-mapped variants
15
variant allelic effects
13
histone modifications
12
differential activity
10
eQTL
3
caQTL
Date released
291
September, 2022
126
February, 2021
20
September, 2023
18
March, 2020
18
May, 2020
16
January, 2020
15
February, 2024
15
June, 2020
10
February, 2020
9
May, 2021
5
January, 2022
5
November, 2021
4
February, 2023
4
March, 2023
4
November, 2019
3
May, 2019
3
October, 2022
2
April, 2020
2
March, 2024
2
October, 2019
1
August, 2017
1
August, 2021
Available data
399
bed bed3+
107
bed bed9
59
tsv
37
bigWig
11
bigBed bed9
Organism
574
Homo sapiens
Biosample type
399
tissue
154
primary cell
16
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
547
AMP
20
KPMP
5
ENCODE
2
LungMap
Genome assembly (visualization)
523
hg19
178
GRCh38
BIOSAMPLE
TYPE
574 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
binding sites
Fine-mapped variants
variant allelic effects
histone modifications
differential activity
eQTL
caQTL
tissue
muscle of arm
33
16
16
1
1
placenta
26
14
15
1
1
2
1
muscle of leg
27
15
14
2
tibial nerve
6
4
3
3
2
3
2
2
coronary artery
3
3
3
3
1
3
2
2
1
+ See 32 more…
primary cell
endothelial cell of umbilical vein
6
5
4
2
2
1
trophoblast cell
7
4
5
1
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 25 more…
cell line
GM23248
2
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HTR-8/Svneo
1
1
1
vein endothelial cell
1
1
in vitro differentiated cells
trophoblast cell
2
1
2
See all biosamples
Download