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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
107
target gene predictions
106
accessible chromatin
96
chromatin state
29
gene expression
28
binding sites
18
histone modifications
14
variant allelic effects
12
differential activity
10
eQTL
9
Fine-mapped variants
3
caQTL
Date released
251
September, 2022
124
February, 2021
28
February, 2023
26
November, 2021
22
February, 2024
22
November, 2022
20
June, 2020
20
September, 2023
14
March, 2020
13
January, 2020
13
May, 2020
9
May, 2021
7
February, 2020
6
January, 2022
5
August, 2017
5
October, 2022
4
March, 2023
4
March, 2024
3
November, 2019
2
April, 2020
2
October, 2019
1
August, 2021
1
May, 2019
Available data
449
bed bed3+
91
bed bed9
70
bigWig
52
tsv
8
bigBed bed9
Organism
602
Homo sapiens
Biosample type
386
tissue
160
primary cell
50
cell line
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
554
AMP
26
ENCODE
20
KPMP
2
LungMap
Genome assembly (visualization)
549
hg19
169
GRCh38
BIOSAMPLE
TYPE
602 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
Fine-mapped variants
caQTL
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
retina
6
3
23
3
1
1
1
1
1
sigmoid colon
10
7
1
5
coronary artery
3
3
3
3
1
2
2
3
1
+ See 28 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
retinal pigment epithelial cell
2
1
3
1
2
1
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 28 more…
cell line
HT-29
2
2
1
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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