Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
candidate regulatory elements
174
target gene predictions
134
accessible chromatin
133
chromatin state
77
gene expression
51
binding sites
38
histone modifications
28
eQTL
28
variant allelic effects
26
differential activity
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
338
September, 2022
212
February, 2021
72
November, 2021
39
February, 2024
37
September, 2023
33
June, 2020
25
May, 2021
23
March, 2020
21
January, 2020
21
May, 2020
14
February, 2020
14
October, 2022
12
August, 2017
12
August, 2021
12
January, 2022
11
March, 2023
7
November, 2022
5
April, 2020
4
February, 2023
4
March, 2024
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
670
bed bed3+
121
bed bed9
113
tsv
89
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
938
Homo sapiens
Biosample type
411
tissue
405
primary cell
71
cell line
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
820
AMP
72
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
817
hg19
272
GRCh38
2
hg18
BIOSAMPLE
TYPE
938 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
3
1
4
1
sigmoid colon
10
7
1
5
coronary artery
3
3
3
3
1
2
2
3
1
+ See 35 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 68 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 17 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download