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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
279
candidate regulatory elements
178
target gene predictions
170
chromatin state
82
accessible chromatin
58
histone modifications
45
Fine-mapped variants
45
gene expression
41
binding sites
36
eQTL
26
variant allelic effects
12
differential activity
3
caQTL
Date released
447
September, 2022
215
February, 2021
51
March, 2020
39
January, 2020
31
June, 2020
29
May, 2020
23
February, 2020
23
September, 2023
22
January, 2022
18
May, 2021
17
February, 2024
12
November, 2021
12
October, 2022
8
August, 2017
5
April, 2020
5
May, 2019
4
February, 2023
4
March, 2023
4
November, 2019
3
March, 2024
2
October, 2019
1
August, 2021
Available data
666
bed bed3+
162
bed bed9
115
tsv
52
bigWig
14
bigBed bed9
Organism
974
Homo sapiens
Biosample type
614
tissue
179
cell line
177
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
938
AMP
20
KPMP
12
ENCODE
5
LungMap
Genome assembly (visualization)
885
hg19
304
GRCh38
BIOSAMPLE
TYPE
975 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
gene expression
binding sites
eQTL
variant allelic effects
differential activity
caQTL
tissue
brain
29
16
18
2
3
1
1
2
1
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
caudate nucleus
5
3
4
2
1
3
1
2
1
+ See 69 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 19 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of lung
6
4
4
2
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
1
2
+ See 28 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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