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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
candidate regulatory elements
124
target gene predictions
116
chromatin state
59
accessible chromatin
45
gene expression
32
binding sites
24
histone modifications
15
eQTL
14
variant allelic effects
13
differential activity
12
Fine-mapped variants
4
caQTL
Date released
316
September, 2022
132
February, 2021
31
February, 2024
23
March, 2020
20
September, 2023
15
June, 2020
15
November, 2021
14
January, 2020
14
May, 2020
11
August, 2021
10
May, 2021
7
February, 2020
7
October, 2022
5
April, 2020
5
August, 2017
5
January, 2022
4
February, 2023
4
March, 2023
4
November, 2019
2
March, 2024
2
May, 2022
2
October, 2019
1
July, 2020
1
May, 2019
1
September, 2018
Available data
451
bed bed3+
111
bed bed9
68
tsv
49
bigWig
9
bigBed bed9
3
csv
1
bam
Organism
651
Homo sapiens
Biosample type
323
tissue
191
primary cell
130
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
611
AMP
20
KPMP
15
ENCODE
5
LungMap
Genome assembly (visualization)
580
hg19
198
GRCh38
2
hg18
BIOSAMPLE
TYPE
651 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
liver
13
10
9
4
1
1
2
7
1
1
right lung
22
11
11
1
coronary artery
3
3
3
3
1
2
2
3
1
+ See 10 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of lung
6
4
4
2
dermis blood vessel endothelial cell
6
2
2
+ See 24 more…
cell line
A549
21
19
18
1
2
1
HepG2
2
3
2
2
3
5
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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