Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
208
candidate regulatory elements
126
target gene predictions
119
chromatin state
71
accessible chromatin
55
gene expression
29
binding sites
27
histone modifications
21
eQTL
20
variant allelic effects
18
Fine-mapped variants
14
differential activity
6
caQTL
Date released
310
September, 2022
153
February, 2021
45
February, 2024
31
March, 2020
20
September, 2023
19
January, 2020
19
May, 2020
17
November, 2021
15
June, 2020
13
February, 2020
12
August, 2021
12
May, 2021
7
August, 2017
6
October, 2022
5
January, 2022
5
May, 2022
4
February, 2023
4
March, 2023
4
November, 2019
3
March, 2024
3
May, 2019
3
October, 2019
2
April, 2020
1
July, 2020
1
September, 2018
Available data
492
bed bed3+
112
bed bed9
81
tsv
56
bigWig
12
bigBed bed9
3
csv
1
bam
Organism
714
Homo sapiens
Biosample type
448
tissue
206
primary cell
51
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
675
AMP
20
KPMP
17
ENCODE
2
LungMap
Genome assembly (visualization)
637
hg19
214
GRCh38
2
hg18
BIOSAMPLE
TYPE
714 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
liver
13
10
9
4
1
1
2
7
1
1
coronary artery
3
3
3
3
1
2
2
3
1
+ See 29 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
skeletal muscle satellite cell
2
2
2
5
2
dermis blood vessel endothelial cell
6
2
2
+ See 26 more…
cell line
HepG2
2
3
2
2
3
5
LHCN-M2
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
+ See 4 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
myotube
1
1
See all biosamples
Download