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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
accessible chromatin
71
gene expression
63
candidate regulatory elements
63
target gene predictions
45
chromatin state
45
differential activity
21
eQTL
20
binding sites
20
variant allelic effects
12
histone modifications
3
caQTL
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
104
September, 2022
67
February, 2021
51
March, 2023
40
February, 2024
36
May, 2021
March, 2020
21
November, 2021
20
January, 2021
20
September, 2023
17
May, 2020
15
January, 2020
9
August, 2021
8
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
275
bed bed3+
109
tsv
80
bigWig
40
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
460
Homo sapiens
Biosample type
239
primary cell
179
tissue
39
cell line
3
in vitro differentiated cells
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
395
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
326
hg19
123
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
460 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
eQTL
binding sites
variant allelic effects
histone modifications
caQTL
Fine-mapped variants
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
6
3
5
2
1
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 32 more…
tissue
islet of Langerhans
6
9
1
3
13
1
1
1
2
2
2
body of pancreas
2
8
5
4
1
1
pancreas
5
5
3
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
1
tibial artery
3
1
3
2
3
2
2
+ See 15 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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