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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
accessible chromatin
63
candidate regulatory elements
59
target gene predictions
55
gene expression
45
chromatin state
45
differential activity
21
binding sites
21
eQTL
20
variant allelic effects
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
104
September, 2022
67
February, 2021
51
March, 2023
40
February, 2024
May, 2021
21
March, 2020
21
November, 2021
20
January, 2021
20
September, 2023
17
May, 2020
15
January, 2020
9
August, 2021
8
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
264
bed bed3+
107
tsv
80
bigWig
40
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
445
Homo sapiens
Biosample type
226
primary cell
192
tissue
24
cell line
3
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
442
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
380
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
327
hg19
135
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
445 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
6
3
5
2
1
pancreatic beta cell
8
3
2
3
1
pancreatic ductal cell
6
2
2
3
1
1
2
endothelial cell of hepatic sinusoid
6
4
6
pancreatic alpha cell
7
3
2
3
1
+ See 30 more…
tissue
islet of Langerhans
5
1
9
3
2
13
1
2
1
2
2
body of pancreas
8
4
2
4
1
1
3
pancreas
5
5
4
3
1
1
1
1
coronary artery
3
3
2
1
3
2
2
3
1
tibial artery
3
3
2
1
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
1
1
3
1
Panc1
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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