Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
candidate regulatory elements
76
target gene predictions
56
binding sites
44
chromatin state
32
histone modifications
30
accessible chromatin
5
gene expression
2
eQTL
1
pQTL
1
variant allelic effects
Date released
123
September, 2022
115
February, 2021
29
February, 2024
20
October, 2022
18
June, 2020
4
May, 2021
3
August, 2021
3
November, 2021
2
August, 2017
2
January, 2021
1
April, 2020
1
March, 2024
1
May, 2020
1
May, 2022
Available data
274
bed bed3+
41
bed bed9
12
bigWig
5
tsv
1
bed bed9+
Organism
323
Homo sapiens
Biosample type
258
cell line
39
primary cell
26
tissue
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
317
AMP
3
ENCODE
2
T1D
1
LungMap
Genome assembly (visualization)
318
hg19
80
GRCh38
BIOSAMPLE
TYPE
323 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
pQTL
variant allelic effects
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 37 more…
primary cell
bronchial epithelial cell
4
2
2
2
1
1
peripheral blood mononuclear cell
4
1
1
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
club cell
1
2
+ See 6 more…
tissue
bone tissue
4
femur
2
1
1
arm bone
1
1
1
leg bone
1
1
1
blood
2
+ See 10 more…
See all biosamples
Download