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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
224
accessible chromatin
179
target gene predictions
176
gene expression
147
candidate regulatory elements
92
differential activity
89
binding sites
80
chromatin state
53
histone modifications
41
variant allelic effects
5
eQTL
2
caQTL
1
pQTL
Date released
226
September, 2022
204
February, 2021
155
September, 2023
127
November, 2021
104
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
25
October, 2022
20
January, 2021
15
May, 2020
15
November, 2022
14
August, 2021
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
737
bed bed3+
325
tsv
176
bigWig
txt
75
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1089
Homo sapiens
Biosample type
750
primary cell
248
cell line
65
tissue
26
in vitro differentiated cells
Organ
871
epithelium
565
kidney
466
brain
451
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
264
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
778
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
817
hg19
287
GRCh38
files.file_type!
txt
BIOSAMPLE
TYPE
1089 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
pQTL
primary cell
endothelial cell
15
7
6
2
1
2
1
2
hepatocyte
8
3
13
1
1
1
4
2
endothelial cell of umbilical vein
2
4
6
2
5
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
3
1
2
1
+ See 135 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
1
8
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 37 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
kidney epithelium
1
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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