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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
304
candidate regulatory elements
213
target gene predictions
173
chromatin state
81
accessible chromatin
80
histone modifications
69
binding sites
42
Fine-mapped variants
38
eQTL
31
gene expression
24
variant allelic effects
2
caQTL
1
differential activity
1
pQTL
Date released
459
September, 2022
276
February, 2021
47
March, 2020
44
February, 2024
39
June, 2020
34
January, 2020
28
October, 2022
24
February, 2020
24
May, 2020
21
May, 2021
19
January, 2022
11
August, 2017
11
November, 2021
6
May, 2019
4
August, 2021
4
March, 2024
3
May, 2022
3
September, 2023
1
November, 2019
1
October, 2019
Available data
780
bed bed3+
162
bed bed9
82
tsv
37
bigWig
9
bigBed bed9
Organism
1058
Homo sapiens
Biosample type
659
tissue
299
cell line
94
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1048
AMP
11
ENCODE
Genome assembly (visualization)
1007
hg19
301
GRCh38
BIOSAMPLE
TYPE
1059 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
Fine-mapped variants
eQTL
gene expression
variant allelic effects
caQTL
differential activity
pQTL
tissue
brain
29
16
18
2
3
1
2
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
caudate nucleus
5
3
4
2
1
3
2
1
1
+ See 82 more…
cell line
K562
7
23
7
1
1
2
GM12878
2
8
2
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 43 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 15 more…
in vitro differentiated cells
hippocampal neuron
1
1
myotube
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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