Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
candidate regulatory elements
74
target gene predictions
49
binding sites
43
chromatin state
28
histone modifications
14
accessible chromatin
3
eQTL
1
gene expression
1
pQTL
Date released
123
September, 2022
92
February, 2021
28
February, 2024
20
October, 2022
14
June, 2020
5
May, 2021
3
August, 2021
2
August, 2017
1
January, 2022
1
March, 2024
Available data
246
bed bed3+
41
bed bed9
bigWig
1
tsv
Organism
289
Homo sapiens
Biosample type
208
cell line
64
tissue
17
primary cell
Organ
773
epithelium
616
kidney
445
brain
403
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
289
AMP
Genome assembly (visualization)
287
hg19
70
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
289 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 27 more…
tissue
placenta
26
15
1
14
2
1
1
blood
2
cerebrospinal fluid
1
whole blood
1
primary cell
fibroblast of villous mesenchyme
2
1
2
1
1
1
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download