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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
candidate regulatory elements
101
target gene predictions
64
binding sites
38
histone modifications
25
accessible chromatin
3
chromatin state
1
pQTL
1
variant allelic effects
Date released
142
February, 2021
118
September, 2022
29
February, 2024
23
October, 2022
20
June, 2020
10
November, 2021
9
May, 2021
3
August, 2017
1
August, 2021
Available data
355
bed bed3+
59
bed bed9
5
bigWig
3
tsv
Organism
355
Homo sapiens
Biosample type
236
cell line
92
primary cell
18
tissue
9
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
345
AMP
10
ENCODE
Genome assembly (visualization)
355
hg19
38
GRCh38
BIOSAMPLE
TYPE
355 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
chromatin state
pQTL
variant allelic effects
cell line
K562
7
23
2
1
1
1
GM12878
2
8
2
1
1
1
GM06990
2
1
2
1
1
GM19240
1
2
2
1
1
HAP-1
2
2
1
1
1
+ See 46 more…
primary cell
foreskin fibroblast
6
2
4
2
1
foreskin keratinocyte
11
4
keratinocyte
3
5
1
2
2
1
1
fibroblast of dermis
4
4
1
dermis blood vessel endothelial cell
6
2
+ See 10 more…
tissue
lower leg skin
6
2
suprapubic skin
3
skin of body
1
1
skin of forearm
1
1
skin of prepuce of penis
1
1
+ See 1 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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