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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
148
candidate regulatory elements
118
target gene predictions
84
chromatin state
67
binding sites
56
accessible chromatin
38
gene expression
34
histone modifications
18
differential activity
17
variant allelic effects
9
Fine-mapped variants
9
eQTL
3
caQTL
1
pQTL
Date released
219
September, 2022
152
February, 2021
47
February, 2024
35
September, 2023
23
October, 2022
21
June, 2020
16
January, 2020
15
May, 2020
15
November, 2021
13
March, 2020
9
May, 2021
5
February, 2020
4
August, 2017
4
August, 2021
4
February, 2023
4
January, 2022
4
March, 2023
3
April, 2020
3
March, 2024
3
November, 2019
2
October, 2019
1
May, 2019
Available data
446
bed bed3+
80
bed bed9
66
tsv
36
bigWig
8
bigBed bed9
2
txt
Organism
602
Homo sapiens
Biosample type
216
cell line
195
tissue
189
primary cell
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
549
AMP
35
KPMP
15
ENCODE
3
LungMap
Genome assembly (visualization)
537
hg19
173
GRCh38
BIOSAMPLE
TYPE
602 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 30 more…
tissue
stomach
40
21
19
3
1
1
1
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
ascending aorta
4
2
3
1
1
1
3
1
aorta
4
4
4
1
+ See 12 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
2
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 34 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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