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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
97
target gene predictions
64
chromatin state
52
binding sites
31
histone modifications
23
accessible chromatin
5
eQTL
2
gene expression
1
pQTL
Date released
186
September, 2022
115
February, 2021
28
February, 2024
21
October, 2022
20
June, 2020
7
May, 2021
3
August, 2021
3
January, 2022
3
November, 2021
2
August, 2017
2
March, 2024
Available data
321
bed bed3+
62
bed bed9
3
bigWig
2
tsv
Organism
390
Homo sapiens
Biosample type
215
cell line
120
tissue
50
primary cell
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
387
AMP
3
ENCODE
Genome assembly (visualization)
385
hg19
96
GRCh38
BIOSAMPLE
TYPE
390 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 29 more…
tissue
placenta
26
15
14
1
2
1
1
testis
7
3
3
1
1
1
1
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
umbilical cord
2
1
1
1
1
+ See 5 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
2
1
1
peripheral blood mononuclear cell
4
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
+ See 8 more…
in vitro differentiated cells
trophoblast cell
2
2
1
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