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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
163
target gene predictions
135
candidate regulatory elements
72
chromatin state
71
binding sites
41
histone modifications
32
accessible chromatin
12
gene expression
2
eQTL
1
pQTL
1
variant allelic effects
Date released
204
September, 2022
156
February, 2021
80
February, 2024
27
June, 2020
23
October, 2022
13
May, 2021
11
August, 2021
8
November, 2021
4
August, 2017
2
March, 2020
2
March, 2024
Available data
448
bed bed3+
68
bed bed9
12
tsv
5
bigWig
Organism
530
Homo sapiens
Biosample type
368
cell line
77
primary cell
51
tissue
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
522
AMP
8
ENCODE
Genome assembly (visualization)
518
hg19
155
GRCh38
BIOSAMPLE
TYPE
530 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
pQTL
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
1
8
K562
23
7
7
2
1
1
MCF-7
6
9
5
3
2
1
GM12878
8
2
2
2
1
1
H9
8
7
1
+ See 48 more…
primary cell
trophoblast cell
5
7
4
1
1
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
4
1
fibroblast of mammary gland
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
+ See 6 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
urinary bladder
2
3
2
1
embryonic facial prominence
1
1
1
1
blood
2
+ See 8 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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