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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
107
accessible chromatin
97
target gene predictions
73
binding sites
69
chromatin state
37
gene expression
37
histone modifications
18
differential activity
17
variant allelic effects
9
Fine-mapped variants
9
eQTL
3
caQTL
1
pQTL
Date released
177
September, 2022
140
February, 2021
46
February, 2024
35
September, 2023
28
February, 2023
25
October, 2022
24
June, 2020
22
November, 2022
18
January, 2020
17
May, 2020
12
March, 2020
10
November, 2021
7
February, 2020
7
May, 2021
4
August, 2021
4
March, 2023
3
April, 2020
3
August, 2017
3
January, 2022
3
November, 2019
2
October, 2019
1
March, 2024
1
May, 2019
Available data
451
bed bed3+
67
bigWig
66
bed bed9
66
tsv
8
bigBed bed9
2
txt
Organism
592
Homo sapiens
Biosample type
226
cell line
201
primary cell
157
tissue
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
544
AMP
35
KPMP
10
ENCODE
3
LungMap
Genome assembly (visualization)
528
hg19
156
GRCh38
BIOSAMPLE
TYPE
592 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
gene expression
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
pQTL
cell line
K562
7
1
23
2
7
1
GM12878
2
1
8
2
2
1
GM06990
2
1
1
2
1
1
GM19240
1
1
2
2
1
1
HAP-1
2
1
2
1
1
1
+ See 33 more…
primary cell
endothelial cell of umbilical vein
6
2
4
2
5
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
retinal pigment epithelial cell
2
3
1
2
1
1
fibroblast of pulmonary artery
2
1
1
2
1
1
+ See 35 more…
tissue
retina
6
23
3
1
3
1
1
1
1
coronary artery
3
3
3
3
1
2
3
2
1
pigmented layer of retina
20
tibial artery
3
3
2
3
1
2
3
2
ascending aorta
4
1
2
3
1
1
3
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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