Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
60
target gene predictions
50
chromatin state
28
accessible chromatin
26
binding sites
19
histone modifications
3
eQTL
1
variant allelic effects
Date released
144
September, 2022
100
February, 2021
13
June, 2020
11
November, 2021
5
May, 2021
5
October, 2022
3
January, 2022
2
January, 2021
1
August, 2017
1
February, 2024
1
May, 2020
1
May, 2022
Available data
235
bed bed3+
48
bed bed9
15
bigWig
1
bed bed9+
Organism
287
Homo sapiens
Biosample type
123
cell line
114
primary cell
41
tissue
9
in vitro differentiated cells
Organ
610
epithelium
440
brain
394
connective tissue
388
kidney
368
musculature of body
310
lung
286
intestine
239
limb
234
heart
217
bodily fluid
214
vasculature
206
blood
205
embryo
202
skin of body
190
pancreas
172
large intestine
169
blood vessel
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adipose tissue
72
adrenal gland
65
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
21
vein
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
274
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
284
hg19
70
GRCh38
BIOSAMPLE
TYPE
287 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
cell line
GM23248
2
1
1
1
1
1
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
L1-S8
2
1
1
1
+ See 26 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 14 more…
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
femur
2
1
1
arm bone
1
1
1
leg bone
1
1
1
+ See 11 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download