Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
34
candidate regulatory elements
23
target gene predictions
19
chromatin state
11
accessible chromatin
5
gene expression
3
histone modifications
2
binding sites
1
eQTL
Date released
54
September, 2022
33
February, 2021
2
January, 2021
2
May, 2021
1
January, 2022
1
June, 2020
1
March, 2020
1
March, 2024
1
May, 2020
1
May, 2022
1
November, 2021
Available data
73
bed bed3+
18
bed bed9
10
bigWig
5
tsv
1
bed bed9+
Organism
98
Homo sapiens
Biosample type
84
tissue
cell line
14
primary cell
Organ
epithelium
611
kidney
429
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
95
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
92
hg19
28
GRCh38
biosample_type!
cell line
organ_slims!
epithelium
BIOSAMPLE
TYPE
98 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
tissue
adrenal gland
28
17
14
1
1
1
bone tissue
4
femur
2
1
1
arm bone
1
1
1
leg bone
1
1
1
+ See 8 more…
primary cell
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
mononuclear cell of bone marrow
1
2
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
bone cell
1
+ See 1 more…
See all biosamples
Download