Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
20
accessible chromatin
16
candidate regulatory elements
14
target gene predictions
13
chromatin state
11
gene expression
7
binding sites
7
histone modifications
6
Fine-mapped variants
5
eQTL
4
variant allelic effects
2
caQTL
2
differential activity
Date released
33
September, 2022
30
February, 2021
6
March, 2020
6
May, 2020
5
September, 2023
4
February, 2020
4
January, 2020
3
February, 2023
3
January, 2022
3
June, 2020
2
January, 2021
2
May, 2021
2
November, 2019
1
May, 2019
1
May, 2022
1
November, 2021
1
October, 2022
Available data
70
bed bed3+
19
tsv
18
bigWig
12
bed bed9
2
bigBed bed9
1
bed bed9+
Organism
107
Homo sapiens
Biosample type
64
tissue
cell line
43
primary cell
Organ
906
epithelium
611
kidney
429
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
99
AMP
5
KPMP
2
T1D
1
ENCODE
Genome assembly (visualization)
89
hg19
40
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
107 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
caQTL
differential activity
tissue
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
3
3
2
3
1
3
2
2
bone tissue
4
femur
2
1
1
arm bone
1
1
1
+ See 11 more…
primary cell
fibroblast of pulmonary artery
1
2
1
1
2
1
pulmonary artery endothelial cell
1
2
1
1
1
1
Afferent / Efferent Arteriole Endothelial Cell
3
2
aortic endothelial cell
2
1
1
megakaryocyte
2
2
+ See 7 more…
See all biosamples
Download