Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
66
chromatin state
65
target gene predictions
50
candidate regulatory elements
32
accessible chromatin
19
gene expression
10
variant allelic effects
9
Fine-mapped variants
6
eQTL
2
caQTL
1
binding sites
Date released
150
September, 2022
February, 2021
15
March, 2020
12
January, 2020
12
May, 2020
11
February, 2020
11
November, 2021
10
June, 2020
8
August, 2021
6
April, 2019
5
February, 2024
4
May, 2021
3
February, 2023
3
January, 2022
3
November, 2019
2
January, 2021
2
October, 2019
1
May, 2019
1
May, 2022
1
October, 2022
Available data
165
bed bed3+
60
bed bed9
27
tsv
23
bigWig
10
bigBed bed9
1
bed bed9+
Organism
260
Homo sapiens
Biosample type
188
tissue
38
cell line
33
primary cell
1
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
247
AMP
11
ENCODE
2
T1D
Genome assembly (visualization)
236
hg19
107
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
260 results
search-icon
table-tab-icon
Clear Filters
chromatin state
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
variant allelic effects
Fine-mapped variants
eQTL
caQTL
binding sites
tissue
heart
21
20
19
5
2
2
heart left ventricle
8
7
5
3
1
2
1
coronary artery
3
3
2
3
1
2
3
2
1
right atrium auricular region
2
2
2
3
2
2
3
2
heart right ventricle
5
5
3
1
1
1
+ See 12 more…
cell line
L1-S8
1
1
1
1
L1-S8R
1
1
1
1
MG63
1
1
1
1
SJSA1
1
1
1
1
HS-27A
1
1
1
+ See 7 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
megakaryocyte
2
2
endocardial cell
1
2
smooth muscle cell of the coronary artery
1
1
1
stromal cell of bone marrow
1
1
1
+ See 6 more…
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download