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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
125
target gene predictions
121
candidate regulatory elements
71
chromatin state
53
accessible chromatin
39
gene expression
37
binding sites
23
histone modifications
12
differential activity
9
Fine-mapped variants
9
variant allelic effects
6
eQTL
3
caQTL
Date released
183
September, 2022
125
February, 2021
66
February, 2024
20
September, 2023
19
June, 2020
13
March, 2020
12
May, 2020
11
January, 2020
10
May, 2021
9
August, 2021
6
November, 2021
5
February, 2020
4
February, 2023
4
March, 2023
4
October, 2022
3
January, 2022
3
November, 2019
2
April, 2020
2
August, 2017
2
January, 2021
2
October, 2019
1
March, 2024
1
May, 2019
1
May, 2022
Available data
371
bed bed3+
68
bed bed9
61
tsv
35
bigWig
8
bigBed bed9
1
bed bed9+
Organism
508
Homo sapiens
Biosample type
186
cell line
150
primary cell
141
tissue
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
478
AMP
20
KPMP
6
ENCODE
2
LungMap
2
T1D
Genome assembly (visualization)
449
hg19
177
GRCh38
organ_slims!
large intestine
BIOSAMPLE
TYPE
508 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
differential activity
Fine-mapped variants
variant allelic effects
eQTL
caQTL
cell line
H1-hESC
39
1
1
1
8
2
1
H9
8
7
1
MG63
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 27 more…
primary cell
endothelial cell of umbilical vein
4
6
5
2
2
1
trophoblast cell
5
7
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
2
6
2
fibroblast of pulmonary artery
1
2
1
1
2
1
+ See 25 more…
tissue
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
2
3
3
3
1
3
2
2
ascending aorta
2
4
3
1
1
3
1
1
chorionic villus
4
8
4
aorta
4
4
4
1
+ See 22 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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