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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
target gene predictions
88
candidate regulatory elements
47
chromatin state
27
accessible chromatin
21
binding sites
17
histone modifications
16
gene expression
3
Fine-mapped variants
2
eQTL
2
variant allelic effects
Date released
132
September, 2022
92
February, 2021
51
February, 2024
16
June, 2020
8
August, 2021
7
May, 2021
4
March, 2020
4
May, 2020
3
February, 2020
2
January, 2021
2
October, 2022
1
August, 2017
1
January, 2020
1
January, 2022
1
May, 2022
1
November, 2019
Available data
259
bed bed3+
45
bed bed9
20
tsv
11
bigWig
1
bed bed9+
1
bigBed bed9
Organism
326
Homo sapiens
Biosample type
180
cell line
82
tissue
33
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
324
AMP
ENCODE
2
T1D
Genome assembly (visualization)
309
hg19
111
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
326 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
Fine-mapped variants
eQTL
variant allelic effects
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
MG63
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 25 more…
tissue
tibial nerve
3
6
4
3
2
3
2
2
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
bone tissue
4
embryonic facial prominence
1
1
1
1
+ See 14 more…
primary cell
trophoblast cell
5
7
4
1
1
stromal cell of bone marrow
1
2
1
megakaryocyte
2
1
mononuclear cell of bone marrow
2
1
primordial germ cell
1
1
+ See 3 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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