Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
target gene predictions
82
candidate regulatory elements
27
accessible chromatin
21
binding sites
17
histone modifications
1
chromatin state
Date released
85
February, 2021
82
September, 2022
51
February, 2024
15
June, 2020
5
May, 2021
3
November, 2021
2
January, 2021
2
October, 2022
1
August, 2017
1
March, 2020
1
May, 2020
Available data
248
bed bed3+
41
bed bed9
14
tsv
12
bigWig
1
bed bed9+
Organism
248
Homo sapiens
Biosample type
152
cell line
43
tissue
30
primary cell
22
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
243
AMP
3
ENCODE
2
T1D
Genome assembly (visualization)
248
hg19
62
GRCh38
BIOSAMPLE
TYPE
248 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
cell line
H1-hESC
39
1
1
2
1
H9
8
7
HUES8
4
1
1
MG63
1
2
1
1
1
CyT49
4
1
+ See 25 more…
tissue
chorionic villus
4
8
trophoblast
3
4
1
1
embryonic facial prominence
1
1
1
femur
1
2
arm bone
1
1
+ See 12 more…
primary cell
trophoblast cell
5
7
1
1
megakaryocyte
2
2
mononuclear cell of bone marrow
2
1
stromal cell of bone marrow
1
2
primordial germ cell
1
1
+ See 4 more…
in vitro differentiated cells
endodermal cell
2
4
mesodermal cell
1
4
1
trophoblast cell
2
2
ectodermal cell
1
2
cardiac mesoderm primordium
1
1
+ See 1 more…
stem cell
H1-hESC
1
See all biosamples
Download