Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
51
chromatin state
50
target gene predictions
49
accessible chromatin
36
binding sites
29
gene expression
16
histone modifications
12
differential activity
9
Fine-mapped variants
9
variant allelic effects
6
eQTL
3
caQTL
Date released
126
September, 2022
99
February, 2021
20
September, 2023
17
June, 2020
15
February, 2024
12
March, 2020
12
May, 2020
11
January, 2020
5
February, 2020
5
October, 2022
4
February, 2023
4
March, 2023
4
May, 2021
4
November, 2021
3
January, 2022
3
November, 2019
2
April, 2020
2
January, 2021
2
October, 2019
1
August, 2017
1
August, 2021
1
March, 2024
1
May, 2019
1
May, 2022
Available data
247
bed bed3+
51
tsv
49
bed bed9
33
bigWig
8
bigBed bed9
1
bed bed9+
Organism
355
Homo sapiens
Biosample type
128
primary cell
121
cell line
106
tissue
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
327
AMP
20
KPMP
4
ENCODE
2
LungMap
2
T1D
Genome assembly (visualization)
306
hg19
105
GRCh38
BIOSAMPLE
TYPE
355 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
binding sites
gene expression
histone modifications
differential activity
Fine-mapped variants
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell of umbilical vein
6
5
4
2
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
pulmonary artery endothelial cell
2
1
1
1
1
1
+ See 21 more…
cell line
GM12864
2
1
1
1
2
1
GM12865
2
1
1
1
2
1
MM.1S
2
1
2
1
1
1
MG63
2
1
1
1
1
1
GM10248
2
1
1
1
1
+ See 23 more…
tissue
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
3
3
2
3
1
3
2
2
ascending aorta
4
3
2
1
1
3
1
1
aorta
4
4
4
1
thoracic aorta
4
3
2
1
1
+ See 16 more…
See all biosamples
Download