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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
229
accessible chromatin
142
target gene predictions
134
candidate regulatory elements
92
differential activity
72
chromatin state
54
binding sites
41
variant allelic effects
35
histone modifications
5
eQTL
2
caQTL
Date released
240
February, 2021
205
September, 2022
155
September, 2023
128
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
32
June, 2020
23
August, 2021
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
October, 2022
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
March, 2024
3
May, 2022
2
January, 2022
1
July, 2020
1
November, 2019
Available data
636
bed bed3+
326
tsv
186
bigWig
78
txt
68
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1061
Homo sapiens
Biosample type
834
primary cell
103
cell line
98
tissue
26
in vitro differentiated cells
Organ
947
epithelium
650
kidney
465
brain
460
connective tissue
373
musculature of body
310
lung
286
intestine
277
pancreas
265
vasculature
255
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
156
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
747
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
708
hg19
263
GRCh38
month_released!
March, 2024
BIOSAMPLE
TYPE
1061 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 153 more…
cell line
EndoC_BH1
8
8
1
3
1
MG63
1
1
2
1
1
1
NT2-D1 cell
1
1
1
1
2
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
+ See 19 more…
tissue
pigmented layer of retina
20
testis
1
3
7
3
1
1
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
bone tissue
4
+ See 26 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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