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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
105
accessible chromatin
59
candidate regulatory elements
49
gene expression
43
target gene predictions
40
binding sites
32
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
9
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
September, 2022
151
February, 2021
52
November, 2021
26
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
13
October, 2022
12
May, 2020
11
August, 2021
10
January, 2020
10
March, 2020
9
February, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
4
January, 2021
4
May, 2022
3
April, 2020
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
307
bed bed3+
66
bigWig
65
tsv
7
txt
2
bigBed bed9
1
bed bed9
1
bed bed9+
1
bigBed narrowPeak
Organism
398
Homo sapiens
Biosample type
219
primary cell
95
tissue
45
cell line
38
in vitro differentiated cells
1
stem cell
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
318
AMP
52
ENCODE
15
KPMP
4
ITG
4
T1D
3
LungMap
2
community
Genome assembly (visualization)
325
hg19
92
GRCh38
2
hg18
month_released!
September, 2022
BIOSAMPLE
TYPE
398 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
1
2
1
3
2
foreskin fibroblast
1
5
1
4
2
pancreatic stellate cell
2
2
1
3
+ See 48 more…
tissue
subcutaneous adipose tissue
2
2
5
6
1
1
1
3
thymus
1
9
3
1
1
adipose tissue
2
1
3
2
1
4
1
omental fat pad
2
3
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 16 more…
cell line
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
MG63
1
1
1
1
U2OS
1
2
1
OCI-LY1
1
1
1
+ See 17 more…
in vitro differentiated cells
adipocyte
4
2
1
4
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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