Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
accessible chromatin
74
target gene predictions
69
candidate regulatory elements
51
gene expression
43
chromatin state
33
differential activity
14
binding sites
14
eQTL
13
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
119
September, 2022
78
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
22
January, 2021
20
November, 2021
10
June, 2020
10
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
1
October, 2022
Available data
267
bed bed3+
78
tsv
68
bigWig
38
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
413
Homo sapiens
Biosample type
182
tissue
141
primary cell
87
cell line
3
in vitro differentiated cells
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
369
AMP
22
T1D
20
ENCODE
2
community
Genome assembly (visualization)
319
hg19
95
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
413 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
thymus
1
14
20
11
1
1
islet of Langerhans
6
1
11
3
2
13
1
1
2
2
2
body of pancreas
5
8
1
4
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 19 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 19 more…
cell line
EndoC_BH1
8
1
8
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download