Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
25
accessible chromatin
25
candidate regulatory elements
24
gene expression
23
target gene predictions
19
chromatin state
16
histone modifications
15
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
49
September, 2022
31
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
6
November, 2021
5
June, 2020
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
110
bed bed3+
28
tsv
24
bigWig
15
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
167
Homo sapiens
Biosample type
74
primary cell
58
tissue
28
cell line
7
in vitro differentiated cells
Organ
929
epithelium
652
kidney
466
brain
456
connective tissue
375
musculature of body
311
lung
289
intestine
266
vasculature
257
pancreas
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
135
hg19
62
GRCh38
2
hg18
month_released!
January, 2021
BIOSAMPLE
TYPE
167 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
stromal cell of bone marrow
2
1
1
+ See 5 more…
tissue
liver
4
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download