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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
132
candidate regulatory elements
92
target gene predictions
84
chromatin state
51
accessible chromatin
51
histone modifications
42
Fine-mapped variants
42
eQTL
32
gene expression
20
binding sites
20
variant allelic effects
2
differential activity
Date released
207
September, 2022
138
February, 2021
46
March, 2020
33
January, 2020
23
February, 2020
23
May, 2020
22
June, 2020
21
January, 2022
14
May, 2021
8
August, 2017
6
August, 2021
6
October, 2022
4
May, 2019
3
February, 2024
3
September, 2023
2
January, 2021
2
September, 2018
1
January, 2018
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
1
November, 2022
Available data
369
bed bed3+
89
tsv
75
bed bed9
28
bigWig
7
bigBed bed9
1
bed bed9+
Organism
567
Homo sapiens
Biosample type
433
tissue
80
cell line
49
primary cell
5
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
565
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
505
hg19
177
GRCh38
2
hg18
organ_slims!
bronchus
BIOSAMPLE
TYPE
568 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
differential activity
tissue
brain
29
16
18
2
3
2
1
1
1
adipose tissue
7
8
6
2
4
3
1
1
caudate nucleus
5
3
4
2
1
3
2
1
1
subcutaneous adipose tissue
2
1
2
3
6
5
1
1
omental fat pad
5
2
2
2
3
2
2
+ See 64 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 11 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 10 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
white adipose cell
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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