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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
79
target gene predictions
68
candidate regulatory elements
60
binding sites
40
histone modifications
38
accessible chromatin
25
gene expression
10
eQTL
6
chromatin state
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
101
February, 2021
80
September, 2022
57
February, 2024
20
October, 2022
17
June, 2020
12
August, 2021
10
March, 2020
7
May, 2021
6
November, 2021
5
August, 2017
4
March, 2023
4
May, 2020
3
January, 2020
3
May, 2022
2
February, 2020
2
January, 2021
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
293
bed bed3+
bed bed9
29
tsv
25
bigWig
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
338
Homo sapiens
Biosample type
197
cell line
82
primary cell
53
tissue
6
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
330
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
305
hg19
75
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
338 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
chromatin state
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
K562
23
7
2
1
1
1
HepG2
3
2
3
5
2
1
GM12878
8
2
2
1
1
1
GM06990
1
2
2
1
1
GM19240
2
1
2
1
1
+ See 27 more…
primary cell
hepatocyte
3
1
1
4
8
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
peripheral blood mononuclear cell
4
1
1
megakaryocyte
2
2
+ See 7 more…
tissue
liver
10
13
1
2
4
1
7
2
1
1
right lobe of liver
1
2
1
1
3
blood
2
whole blood
1
in vitro differentiated cells
hepatocyte
1
2
hepatocyte(AFP)
3
See all biosamples
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