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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
target gene predictions
123
candidate regulatory elements
102
accessible chromatin
78
binding sites
74
chromatin state
51
histone modifications
50
gene expression
23
eQTL
16
variant allelic effects
14
differential activity
Fine-mapped variants
2
caQTL
2
pQTL
Date released
189
September, 2022
183
February, 2021
51
November, 2021
46
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
17
September, 2023
13
August, 2021
11
May, 2020
10
January, 2020
9
August, 2017
9
February, 2020
7
March, 2023
7
November, 2022
6
January, 2022
4
January, 2021
4
May, 2022
3
April, 2020
3
March, 2020
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
519
bed bed3+
64
bed bed9
60
tsv
57
bigWig
7
txt
2
bigBed bed9
1
bed bed9+
1
bigBed narrowPeak
Organism
670
Homo sapiens
Biosample type
301
primary cell
226
cell line
92
tissue
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
591
AMP
51
ENCODE
15
KPMP
4
ITG
4
T1D
3
LungMap
2
community
Genome assembly (visualization)
596
hg19
168
GRCh38
2
hg18
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
670 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
3
1
2
2
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
1
4
1
2
+ See 50 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
8
7
2
1
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
omental fat pad
2
5
2
2
2
2
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
1
mesenchymal stem cell
3
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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