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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
25
candidate regulatory elements
24
gene expression
24
target gene predictions
21
accessible chromatin
19
chromatin state
16
histone modifications
15
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
49
September, 2022
31
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
6
November, 2021
June, 2020
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
107
bed bed3+
28
tsv
25
bigWig
15
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
164
Homo sapiens
Biosample type
74
primary cell
57
tissue
26
cell line
7
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
438
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
156
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
132
hg19
62
GRCh38
2
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
164 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
3
7
1
4
1
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
1
1
2
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 5 more…
tissue
liver
13
1
10
3
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
3
1
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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