Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
111
accessible chromatin
106
candidate regulatory elements
102
target gene predictions
73
gene expression
67
chromatin state
45
binding sites
39
histone modifications
22
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
169
September, 2022
137
February, 2021
55
November, 2021
47
February, 2024
24
June, 2020
21
August, 2021
19
March, 2020
19
May, 2021
17
September, 2023
13
May, 2020
13
October, 2022
12
January, 2020
11
February, 2020
11
March, 2023
10
August, 2017
January, 2022
7
November, 2022
6
May, 2022
4
January, 2021
3
April, 2020
3
November, 2020
3
September, 2018
2
May, 2024
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2019
Available data
437
bed bed3+
93
tsv
78
bigWig
56
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed narrowPeak
Organism
616
Homo sapiens
Biosample type
343
primary cell
158
tissue
57
cell line
57
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
533
AMP
55
ENCODE
15
KPMP
4
ITG
4
T1D
3
LungMap
2
community
Genome assembly (visualization)
519
hg19
175
GRCh38
4
hg18
month_released!
January, 2022
BIOSAMPLE
TYPE
616 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
8
1
3
13
1
1
4
2
fibroblast
16
4
1
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 52 more…
tissue
liver
4
13
10
1
9
1
2
6
1
1
adipose tissue
2
7
8
3
6
1
3
1
subcutaneous adipose tissue
2
2
5
1
5
1
1
3
omental fat pad
2
5
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 9 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download