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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
29
candidate regulatory elements
accessible chromatin
26
target gene predictions
25
gene expression
21
chromatin state
16
histone modifications
15
binding sites
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
55
September, 2022
32
February, 2021
20
February, 2024
10
August, 2021
10
March, 2020
4
March, 2023
4
May, 2020
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2022
2
May, 2022
1
January, 2020
1
January, 2021
1
July, 2020
1
March, 2024
1
November, 2021
1
October, 2022
Available data
92
bed bed3+
29
tsv
17
bed bed9
9
bigWig
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
153
Homo sapiens
Biosample type
64
tissue
57
primary cell
25
cell line
7
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
372
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
151
AMP
1
ENCODE
1
T1D
Genome assembly (visualization)
119
hg19
46
GRCh38
2
hg18
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
153 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
10
1
9
2
1
7
1
1
vagina
4
2
1
2
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
1
4
1
2
endothelial cell of hepatic sinusoid
4
6
hepatic stellate cell
1
1
1
1
1
1
pancreatic endothelial cell
1
3
stromal cell of bone marrow
2
1
1
+ See 5 more…
cell line
HepG2
2
3
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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