Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
candidate regulatory elements
50
chromatin state
50
target gene predictions
45
accessible chromatin
36
gene expression
35
binding sites
18
differential activity
16
variant allelic effects
15
histone modifications
6
eQTL
3
caQTL
Date released
120
September, 2022
82
February, 2021
35
September, 2023
18
February, 2024
16
January, 2020
16
May, 2020
13
November, 2021
March, 2020
10
June, 2020
7
October, 2022
5
February, 2020
5
May, 2021
4
February, 2023
4
March, 2023
3
April, 2020
3
January, 2022
3
November, 2019
2
August, 2017
2
January, 2021
2
October, 2019
1
August, 2021
1
March, 2024
1
May, 2019
1
May, 2022
Available data
244
bed bed3+
55
tsv
47
bed bed9
36
bigWig
8
bigBed bed9
2
txt
1
bed bed9+
Organism
354
Homo sapiens
Biosample type
227
primary cell
75
tissue
47
cell line
5
in vitro differentiated cells
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
301
AMP
35
KPMP
13
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
292
hg19
100
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
354 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell of umbilical vein
6
5
3
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
mammary gland epithelial cell
3
3
4
1
1
1
dermis blood vessel endothelial cell
6
2
2
mammary epithelial cell
3
1
1
1
4
+ See 37 more…
tissue
coronary artery
3
3
3
3
1
2
2
1
tibial artery
3
3
2
3
1
2
2
ascending aorta
4
3
2
1
1
1
1
aorta
4
4
2
1
thoracic aorta
4
3
2
1
1
+ See 5 more…
cell line
MCF-7
9
5
6
1
3
2
T47D
3
2
2
smooth muscle cell of the coronary artery
1
1
1
1
MCF 10A
3
choroid plexus epithelial cell
1
1
1
+ See 2 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download