Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
161
candidate regulatory elements
114
accessible chromatin
91
chromatin state
90
target gene predictions
41
gene expression
31
binding sites
23
variant allelic effects
18
differential activity
16
histone modifications
15
Fine-mapped variants
10
eQTL
3
caQTL
Date released
237
September, 2022
128
February, 2021
35
September, 2023
28
February, 2023
25
May, 2020
23
January, 2020
22
November, 2022
18
February, 2024
18
March, 2020
17
June, 2020
12
February, 2020
11
November, 2021
6
May, 2021
6
October, 2022
4
January, 2022
4
March, 2023
4
November, 2019
3
April, 2020
3
May, 2019
2
January, 2021
2
March, 2024
2
October, 2019
1
August, 2017
1
August, 2021
1
May, 2022
Available data
437
bed bed3+
89
bed bed9
81
bigWig
78
tsv
11
bigBed bed9
2
txt
1
bed bed9+
Organism
613
Homo sapiens
Biosample type
371
tissue
206
primary cell
28
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
562
AMP
35
KPMP
11
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
544
hg19
173
GRCh38
BIOSAMPLE
TYPE
613 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
target gene predictions
gene expression
binding sites
variant allelic effects
differential activity
histone modifications
Fine-mapped variants
eQTL
caQTL
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
15
14
retina
6
23
3
3
1
1
1
1
1
tibial nerve
6
3
4
3
2
2
3
2
coronary artery
3
3
3
3
1
2
3
2
1
+ See 30 more…
primary cell
endothelial cell of umbilical vein
6
2
5
4
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
retinal pigment epithelial cell
2
3
1
1
2
1
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 39 more…
cell line
WERI-Rb-1
2
1
1
1
2
1
GM23248
2
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download